PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIUR3_13152-P1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family bHLH
Protein Properties Length: 398aa    MW: 42826.7 Da    PI: 8.7077
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIUR3_13152-P1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH43.26.9e-14140186455
                      HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
              HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                       h ++ErrRR++iN+++ eL +l+P +     kK++Ka+i   Av+++++Lq
  TRIUR3_13152-P1 140 DHIIAERRRREKINQRLMELSTLIPGL-----KKMNKATIIGDAVKHVRELQ 186
                      5999***********************.....9******************9 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088815.262136185IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.1E-16140189IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474597.72E-16141200IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.9E-11141186IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.52E-14141189No hitNo description
SMARTSM003532.2E-13142191IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 398 aa     Download sequence    Send to blast
MEESSFMQWA INTLDQHTFP AAASLVYDTG SFHCGDHTAA SFPSQQELGT PPQPLPTTAG  60
DNPDLTVQVD NQYGDSSSGD VVVHAAVARA STPMSWKSSA ASTQPAARGG HKSAAGRRSG  120
SNLQGSAASA SSMSPDPAKD HIIAERRRRE KINQRLMELS TLIPGLKKMN KATIIGDAVK  180
HVRELQEKVN ILENNNKHAA TTTICSTVLV HKNRPCLGGL TSNYGDDNVS EPSQLGTWLP  240
EIKVRFSDKS VLVQIHCENT NGLLVRVLAE VEVLRLAITH TSSMPFLADT TIINITAKAS  300
STQTVIFVPL RFFFKQGNPW ALISSVCIAY TTLVQPIYLI SVGRGVQLNS GGDGQKAQLG  360
ARSTLGYPQP VPYTMVKLVF DVFVSMLTIM GPSPNTTK
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1144149ERRRRE
2145150RRRREK
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_003579101.13e-64PREDICTED: transcription factor bHLH18-like
RefseqXP_014758054.13e-64PREDICTED: transcription factor bHLH18-like
TrEMBLT1M6K80.0T1M6K8_TRIUA; Uncharacterized protein
STRINGSb08g022760.17e-64(Sorghum bicolor)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP92731143
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37850.16e-31bHLH family protein